Changes on docker-compose and mysql-docker-compose yml files, health endpoint...

Changes on docker-compose and mysql-docker-compose yml files, health endpoint added, fixes at Read The Doc tool, metadata searchWithFilters endpoint fixed and other bug fixes

.gitlab-ci.yml

-variables:
-  KUBERNETES_PRIVILEGED: "true"
-  DOCKER_BUILDKIT: 1
-  BUILDKIT_PROGRESS: plain
-  DOCKER_CLI: '1'
-  CI_PROJECT_DIR:  "."  
-
-
-stages:
+# This file is a template, and might need editing before it works on your project.
+# This is a sample GitLab CI/CD configuration file that should run without any modifications.
+# It demonstrates a basic 3 stage CI/CD pipeline. Instead of real tests or scripts,
+# it uses echo commands to simulate the pipeline execution.
+#
+# A pipeline is composed of independent jobs that run scripts, grouped into stages.
+# Stages run in sequential order, but jobs within stages run in parallel.
+#
+# For more information, see: https://docs.gitlab.com/ee/ci/yaml/index.html#stages
+#
+# You can copy and paste this template into a new `.gitlab-ci.yml` file.
+# You should not add this template to an existing `.gitlab-ci.yml` file by using the `include:` keyword.
+#
+# To contribute improvements to CI/CD templates, please follow the Development guide at:
+# https://docs.gitlab.com/ee/development/cicd/templates.html
+# This specific template is located at:
+# https://gitlab.com/gitlab-org/gitlab/-/blob/master/lib/gitlab/ci/templates/Getting-Started.gitlab-ci.yml
+
+stages:          # List of stages for jobs, and their order of execution
   - build
   - test
   - deploy
-  - notify
-
-include:
-  - project: 'eclipsefdn/it/releng/gitlab-runner-service/gitlab-ci-templates'
-    file: '/jobs/buildkit.gitlab-ci.yml'
-    
-
-
-
-buildkit:
-  extends: .buildkit
-  variables:
-      CI_REGISTRY_IMAGE: datamite/logging
-  rules:
-    # Trigger for merge requests
-    - if: $CI_COMMIT_BRANCH   == "main" 
-      when: always
-    # Default rule to block other triggers
-    - when: never
-
-
-
-  
-notify_update:
-  stage: notify
-  trigger:
-    project: eclipse-research-labs/datamite-project/data-support-tools/data_ingestion_and_storage/infrastructure
-  rules:
-    # Trigger for merge requests
-    - if: $CI_COMMIT_BRANCH  == "main"
-      when: always
-    # Default rule to block other triggers
-    - when: never
-
-
-
 
+build-job:       # This job runs in the build stage, which runs first.
+  stage: build
+  script:
+    - echo "Compiling the code..."
+    - echo "Compile complete."
+
+unit-test-job:   # This job runs in the test stage.
+  stage: test    # It only starts when the job in the build stage completes successfully.
+  script:
+    - echo "Running unit tests... This will take about 60 seconds."
+    - sleep 60
+    - echo "Code coverage is 90%"
+
+lint-test-job:   # This job also runs in the test stage.
+  stage: test    # It can run at the same time as unit-test-job (in parallel).
+  script:
+    - echo "Linting code... This will take about 10 seconds."
+    - sleep 10
+    - echo "No lint issues found."
+
+deploy-job:      # This job runs in the deploy stage.
+  stage: deploy  # It only runs when *both* jobs in the test stage complete successfully.
+  environment: production
+  script:
+    - echo "Deploying application..."
+    - echo "Application successfully deployed."

Dockerfile

+FROM node:16.13
 
+# Create the required folders
+RUN mkdir /opt/nodejs-server
+RUN mkdir /opt/nodejs-server/dist
+RUN mkdir /opt/nodejs-server/log
 
-FROM node:16.13
+# Copy all required files
+COPY ./dist /opt/nodejs-server/dist
+COPY ./src /opt/nodejs-server/src
+COPY ./package*.json /opt/nodejs-server/
+COPY ./nodemon.json /opt/nodejs-server/
+COPY ./ormconfig.json /opt/nodejs-server/
+COPY ./swagger_output.json /opt/nodejs-server/
+COPY ./tsconfig.json /opt/nodejs-server/
+COPY ./tslint.json /opt/nodejs-server/
+
+RUN apt-get update;
+RUN apt-get install nano;
+
+# Change working directory
+WORKDIR /opt/nodejs-server
+
+RUN npm install
+RUN npm run build
+
+COPY ./src/swagger_output.json /opt/nodejs-server/dist/
+
+EXPOSE 29788
+
+CMD ["npm", "start"]
\ No newline at end of file