Nek Model Launcher is failing to connect to remote host
Created by: SmithRWORNL
I attempted to follow the tutorial at the wiki. After launching the job, I received the following standard error output:
Log of standard error collected by ICE for Nek5000 Launcher 2 Job launch date: 20160609_124716 Launch host: UltraFluffy Target host: localhost Command Executed: cp -r /home/username/nek5000-svn/examples/conj_ht/* .;rm -rf obj/;cp conj_ht.rea conj_ht.rea;/home/username/nek5000-svn/trunk/tools/scripts/nek conj_ht;/home/username/nek5000-svn/trunk/tools/scripts/visnek conj_ht; conj_ht.rea Working directory: iceLaunch_20160609124715
cp: cannot stat â€˜/home/username/nek5000-svn/examples/conj_ht/*â€™: No such file or directory cp: â€˜conj_ht.reaâ€™ and â€˜conj_ht.reaâ€™ are the same file ./launchJob_20160609124716.sh: line 4: /home/username/nek5000-svn/trunk/tools/scripts/nek: No such file or directory ./launchJob_20160609124716.sh: line 5: /home/username/nek5000-svn/trunk/tools/scripts/visnek: No such file or directory ./launchJob_20160609124716.sh: line 6: conj_ht.rea: command not found
Note that I was attempting to connect to another host. Despite the fact that I had listed "megafluffy" as the connection's hostname, and I was prompted for the username and password when adding it to the host table, the output claims the target host is "localhost" instead.
Also of note is that the program seems to be assuming the Nek5000 install is of a certain structure that is not reflected in the versions I downloaded this morning. For example, it is attempting to launch /trunk/tools/scripts/visnek. However, visnek is located under at /bin/visnek instead. I think that the Nek5000 repo structure may have changed since the last time our code was updated, and so it can no longer find any of the correct files to launch.