UnifiedVizRefactor_NoReactor

Conflicts:
	org.eclipse.ice.client.widgets.moose/META-INF/MANIFEST.MF
	org.eclipse.ice.io/OSGI-INF/HdfIOFactory.xml
	org.eclipse.ice.io/OSGI-INF/HdfIORegistry.xml
	org.eclipse.ice.repository/ice.product

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Updated AbstractControllerTester for AbstractController's new
functionalities. 

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Modified the core OSGi launch to properly load JavaFX classes.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Added a test class for the UpdateableSubscriptionManager, which has been
changed so that it will pass on only message types listeners are
subscribed for, rather than send all messages to everything which is
subscribed to any of them. 

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

This commit features a working Plant View in JavaFX. the
IControllerFactories have been refactored to avoid use of instanceof and
to extend from an AbstractControllerFactory.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Debugging issues related to the way HeatExchangers are constructd and
displayed. HeatExchangers should now be working correctly other than a
small bug with wireframe mode.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Fixed bugs with the Plant View, including an issue with the converter
hooking up core channels to junctions and FXPipeViews not removing old
renderings of themselves from the scene graph. Also started changing the
HeatExchanger to work without having to be given child pipes.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Work around for bug where pipes are being read from the composite
repeatedly with different locations. The converter now checks if a pipe
with that id already exists in the plant before placing it in the tree.
Since the first one read was always the correct one, this essentially
fixes the bug.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Refactored the conversion from ICE Components to JavaFX data structures
so that the ICE packages depend on the viz.service.* packages, instead
of the other way around. 

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Removed all dependencies on com.jme3.* from non-jme3 ICE bundles.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Got the wireframe mode for the Plant View working and broke all
dependencies of ice.viz.* packages on non-viz ice.* packages.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Fixed issues with Plant View modeling part display in the Geometry
Editor, including pipe angling calculations and junction and reactor
dimension issues.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Fixing issues with the way the Plant View is populated and its contents
are drawn.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Made progress on correcting bugs with the JavaFX Plant View which
prevent it from being initialized.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Conflicts:
	org.eclipse.ice.client.widgets.moose/src/org/eclipse/ice/client/widgets/moose/MOOSEFormEditor.java
	org.eclipse.ice.client.widgets.reactoreditor.lwr/META-INF/MANIFEST.MF
	org.eclipse.ice.client.widgets.reactoreditor.lwr/src/org/eclipse/ice/client/widgets/reactoreditor/lwr/PlantAnalysisView.java
	org.eclipse.ice.client.widgets/src/org/eclipse/ice/client/widgets/ICEFormEditor.java
	org.eclipse.ice.client.widgets/src/org/eclipse/ice/client/widgets/ICEMeshPage.java
	org.eclipse.ice.datastructures.test/src/org/eclipse/ice/datastructures/test/GeometryTester.java
	org.eclipse.ice.datastructures.test/src/org/eclipse/ice/datastructures/test/ICEShapeTester.java
	org.eclipse.ice.datastructures.test/src/org/eclipse/ice/datastructures/test/MeshComponentTester.java
	org.eclipse.ice.datastructures/src/org/eclipse/ice/datastructures/form/GeometryComponent.java
	org.eclipse.ice.datastructures/src/org/eclipse/ice/datastructures/form/geometry/ICEGeometry.java
	org.eclipse.ice.item/META-INF/MANIFEST.MF
	org.eclipse.ice.nek5000/src/org/eclipse/ice/nek5000/NekWriter.java
	org.eclipse.ice.reactor.plant/META-INF/MANIFEST.MF
	org.eclipse.ice.reactor/META-INF/MANIFEST.MF
	org.eclipse.ice.reactorAnalyzer/META-INF/MANIFEST.MF
	org.eclipse.ice.repository/ice.product
	org.eclipse.ice.tablecomponenttester/META-INF/MANIFEST.MF
	org.eclipse.ice.tablecomponenttester/src/org/eclipse/ice/tablecomponenttester/TableComponentTester.java
	org.eclipse.ice.viz.service.geometry.test/src/org/eclipse/ice/viz/service/geometry/shapes/test/AbstractShapeTester.java
	org.eclipse.ice.viz.service.geometry/src/org/eclipse/ice/viz/service/geometry/shapes/AbstractShape.java
	org.eclipse.ice.viz.service.jme3/src/org/eclipse/ice/viz/service/jme3/geometry/JME3GeometryCanvas.java
	org.eclipse.ice.viz.service.jme3/src/org/eclipse/ice/viz/service/jme3/mesh/JME3MeshCanvas.java
	org.eclipse.ice.viz.service.jme3/src/org/eclipse/ice/viz/service/jme3/mesh/JME3MeshVizService.java
	org.eclipse.ice.viz.service.mesh/src/org/eclipse/ice/viz/service/mesh/properties/GeneralInfoSection.java
	org.eclipse.ice.viz.service.mesh/src/org/eclipse/ice/viz/service/mesh/properties/TabDescriptorProvider.java
	org.eclipse.ice.viz.service/src/org/eclipse/ice/viz/service/AbstractVizService.java
	org.eclipse.ice.viz.service/src/org/eclipse/ice/viz/service/IVizService.java
	org.eclipse.ice.viz.service/src/org/eclipse/ice/viz/service/csv/CSVVizService.java
	pom.xml

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Cameras were broken by the AbstractCameraController refactor. This
commit repairs them.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

The build path for client.widgets.test and datastructures.test had
become corrupted. Changed the library loading order to prioritize the
JRE so they could access Java classes properly. 

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Removed a circular dependency from the package hierarchy.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Finished bringing in the modeling data structures from the reactor
analyzer branch, including breaking the HeatExchanger into its own set
of classes. Added code to convert from the generic PlantComposite to the
unified modeling data types and replaced PlantAppState references in the
MOOSEFormEditor with a generic IPlantView interface.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Continued work on creating a generic IPlantView interface for the jME3
implementation to realize. Also finished the JavaFX camera
implementation for the Plant View's capabilities, including a refactor
to make all camera controllers extend from an AbstractCameraController.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Split the viz.service.javafx package into the shared viz.service.javafx
package and individual packages for the javafx implementations of the
geometry and mesh editors: viz.service.javafx.geometry and
viz.service.javafx.mesh.


Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Got all tests working with the new mesh and geometry editors. Also
renamed most of the data structures involved in the unified MVC data
structures. 

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

I updated the Client so that it retrieves the IWidgetFactory using a
static interface method that accesses the Extension Registry. I have
removed several unused components too and made minor adjustments to
other files as required, such as removing files from build.properties. I
fixed a bug in the build that would miss test files that ended in
Test.java instead of Tester.java. I also added an existence test for
IWidgetFactory.getWidgetFactories().

Signed-off-by: Jay Jay Billings <billingsjj@ornl.gov>

Refactored the EclipseUIWidgetFactory so that it will pull extensions
from the IFormWidgetBuilder extension point in addition to exposing the
registration operation on its interface. I also cleaned up the OSGi
component files that were hanging around for form builders. I cleaned up
some old HDF5 component files too. I removed unneeded auto-launched
bundles from the product too.

Signed-off-by: Jay Jay Billings <billingsjj@ornl.gov>

Further work on ironing out functionality for objects for the
MeshComponentTester.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Added individual run configurations for the SWTBot tests with the
correct set of plug-in dependencies. These are for Windows only, as I'm
intending to create one bulk run configuration for each OS after dealing
with issues that are causing them to fail when all are run from a single
configuration file.

Also made minor changes to the tests to make them compatible with the
latest changes.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Made further changes to MeshComponentTester to work with the changed
Mesh Editor.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Signed-off-by: Jay Jay Billings <billingsjj@ornl.gov>

Conflicts:
	org.eclipse.ice.item/src/org/eclipse/ice/item/action/RemoteFileUploadAction.java
	org.eclipse.ice.item/src/org/eclipse/ice/item/nuclear/MOOSE.java
	org.eclipse.ice.item/src/org/eclipse/ice/item/nuclear/RemoteYamlSyntaxGenerator.java

Signed-off-by: Jay Jay Billings <billingsjj@ornl.gov>

Removed the analysis tool and kdd bundles. Fixed various and sundry
items that broke the build. 

Signed-off-by: Jay Jay Billings <billingsjj@ornl.gov>

Removed some reactor files that were either missed or readded by
mistake.

Signed-off-by: Jay Jay Billings <billingsjj@ornl.gov>

Removed Xolotl plugin. Removed Sassena plugin. Removed Poly plugin.
Removed the Reactor Analyzer. Removed all other Reactor bundles. RIP and
Merry Christmas.

Signed-off-by: Jay Jay Billings <billingsjj@ornl.gov>

UnifiedVizRefactor_NoReactor

Conflicts:
	org.eclipse.ice.client.widgets.test/META-INF/MANIFEST.MF
	org.eclipse.ice.client.widgets/src/org/eclipse/ice/client/widgets/ICEFormEditor.java
	org.eclipse.ice.repository/ice.macosx_product.launch
	org.eclipse.ice.repository/ice.product_linux.launch
	org.eclipse.ice.viz.service.geometry/META-INF/MANIFEST.MF

next

Updated all tests to function with the newly refactored data types.

Also fixed two Mesh Editor bugs. One, caused by drawing from the generic
FXViewer, was causing its composite not to be drawn to full size. The
second allowed a user to keep adding vertices to a polygon indefinitely
if it was selected through the Mesh Elements view. 

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Updated test for the refactored visualization services.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Classes which had been copied between bundles which were being
refactored for the new package structure have had the versions left at
their old locations removed.

Signed-off-by: Robert Smith <SmithRW@ornl.gov>

Signed-off-by: amccaskey <mccaskeyaj@ornl.gov>

Signed-off-by: amccaskey <mccaskeyaj@ornl.gov>